BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013G10LP1|AL426588
(769 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1763 1432 0.0
>3x_Contig1763
Length = 22654
Score = 1432 bits (717), Expect = 0.0
Identities = 753/769 (97%), Gaps = 3/769 (0%)
Strand = Plus / Minus
Query: 1 tcacagttgaatataktaacaattcacgctagatatccaattgtactgttatatgaatta 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5996 tcacagttgaatatagtaacaattcacgctagatatccaattgtactgttatatgaatta 5937
Query: 61 caactgttacaattgcttaccgttactggaactccatgtatattgttcttttgtttagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5936 caactgttacaattgcttaccgttactggaactccatgtatattgttcttttgtttagat 5877
Query: 121 tcggatcagaaccaaaatcactaaaggcaccattaaaaacgcagcttgttcgtttagrtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 5876 tcggatcagaaccaaaatcactaaaggcaccattaaaaacgcagcttgttcgtttagatc 5817
Query: 181 aatttcttgtcacgtgctaaattcaattttcgcagtcttgcttttcaaaataaatttatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5816 aatttcttgtcacgtgctaaattcaattttcgcagtcttgcttttcaaaataaatttatt 5757
Query: 241 ttttaaactgtatttbtcatataccaacaacagcttactgtgcctaggcatatacccttt 300
|||||||||| |||| ||| | |||||||||||||||||||||||||||||||||||
Sbjct: 5756 ttttaaactg-atttttcaaaat--aacaacagcttactgtgcctaggcatatacccttt 5700
Query: 301 aacaatggaaagtggcaaaataagatattgtcaaagtgaatatttgtragtwgtaagaga 360
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 5699 aacaatggaaagtggcaaaataagatattgtcaaagtgaatatttgtaagtagtaagaga 5640
Query: 361 acaagttgttgaaacgttcaaacaggagagaggagtgggtgtaacatacggaaatatata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5639 acaagttgttgaaacgttcaaacaggagagaggagtgggtgtaacatacggaaatatata 5580
Query: 421 ttrntcgcagcgattttccagtgctagttaataactctttccaattgacaacattttgtt 480
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5579 ttaatcgcagcgattttccagtgctagttaataactctttccaattgacaacattttgtt 5520
Query: 481 tgcatttgaactactgacttaagtgattgarttgaatctcattgaattacctattgtcta 540
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 5519 tgcatttgaactactgacttaagtgattgaattgaatctcattgaattacctattgtcta 5460
Query: 541 ttccccattaccaatcagtaacgatttgcagcagcwcataaagcaatcawaataataata 600
||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 5459 ttccccattaccaatcagtaacgatttgcagcagctcataaagcaatcataataataata 5400
Query: 601 acggttcagtatgtttttgactagaagcgaatacgatcgtggtgtgagcactttttcgcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5399 acggttcagtatgtttttgactagaagcgaatacgatcgtggtgtgagcactttttcgcc 5340
Query: 661 tgaaggtcgtcttttccaagttgaatattctttggaagccattaaattggggagtacagc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5339 tgaaggtcgtcttttccaagttgaatattctttggaagccattaaattggggagtacagc 5280
Query: 721 gatcggtgttgttacaaatgaagggattgtacttggagttgagaagcgt 769
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5279 gatcggtgttgttacaaatgaagggattgtacttggagttgagaagcgt 5231
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6079
Number of Sequences: 1807
Number of extensions: 6079
Number of successful extensions: 132
Number of sequences better than 1.0e-20: 1
length of query: 769
length of database: 10,358,551
effective HSP length: 16
effective length of query: 753
effective length of database: 10,329,639
effective search space: 7778218167
effective search space used: 7778218167
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)